On the lowest level is the material/physical world, which depends for its existence on the higher levels. On the very highest/deepest level is the Infinite or Absolute — Wayfarer
My problem with this is that it is so vague that it can be interpreted as being true either way.
So a systems scientist at least would say that the world is both matter and form - or energetic actions and organisational constraints. So the infinite/absolute is understood rather Platonically as mathematical necessity. There are forms of organisation that simply have to be (because they are the most symmetric states, the ones that have the least action).
And although modern physics doesn't proclaim that it thinks this way, in fact it does. The materiality of atomism has long been replaced by the pursuit of the global mathematical symmetries that are the possible forms of localised excitations. Actual matter has been reduced to nothing but some measured constant to be plugged into the equations. Where the forms feel really concrete, the material bit has become as ethereal as can be imagined.
I think it is important to respect this actual shift in scientific thought. In quantum ontology, a particle has become a sum over all its possibilities. So hammering scientists for being dull materialists has become completely wrong.
So yes, science (as an institution) does still reject transcendent or spiritual causation. But if you are making a comparative religion point, science has shifted away from a material substance reductionism towards the other end of the spectrum - seeing mathematical form as the eternal organising force.
And in doing that, it returns towards ancient immanent metaphysics where chaos, or apeiron, or pure potential are the "material grounds" upon which rational necessity imposes its organisational desires.
So science is pre-Christian in going back to first philosophy notions - that you find also in Taoism, Buddhism, Judaism.
That is the irony. Scientism and Christianity would have more in common in framing the world as matter vs mind or spirit. They accept those two apparently conflicting choices as what they either fight for or against.
You want to crusade against materialists? Actual scientists stopped being that - in terms of operative metaphysics - about a century ago.
So in broad terms, what I think has happened to Western culture is that it has been hijacked by a hostile force, almost a parasitic entity, namely scientific materialism. — Wayfarer
Certainly you can name your hate figures - Dawkins, Dennett, Krauss ... er, I guess there are a few more who like the limelight and book sales that come with being the Church's loyal opposition.
And certainly, science in general (as an institution) thinks of itself as doing naturalism. So it would reject any transcendent explanations at a gut level, because its successful working presumption is the world is closed for causality - immanent in its material organisation.
But rather than a hijack, you have the Enlightenment creating its very useful machine model of reality. It was a mode of thought that was great at turning us into technological beings. Then you have the variety of responses that turn of events provoked.
I would say the illegitimate response was Romanticism - or at least that aspect of Romanticism that tried to retrieve a transcendent metaphysics.
The legitimate response - in the sense of being metaphysically correct in its analysis - would be the organicism or systems thinking that persisted in the corners of the larger scientific enterprise, and understood its deeper connections to the ancient metaphysical paradigms.
So this is where we are at. Science did take the view that the world is a machine. Culture did respond by saying that "materialism" is fine as far as it goes, but misses the larger metaphysical picture. But that larger picture is either going to include spirit or some other notion of causal rupture - which at worst becomes "a big daddy in the sky" - or it is instead going to presume that the world is an organic self-organisation out of pure possibility, and build some useful scientific model of that.
As I say, we are a century into that new way of thinking about the world. Yet news of that is being drowned out by all the physics-bashing (and I admit, also by the fact that the computer scientists and neuroscientists - reflecting medicine's belief that the body is another machine - do continue to promote the technologist's metaphysical creed).
However dig into the ontology of modern physics, and it seems as immaterial as it gets. You are dealing with mathematical forms imposed on pure possibility - constraints on actions. But the fact that the metaphysics is now mathematical abstraction makes it also rather inaccessible to most. So that is another ingredient here - why the cultural war takes the shape it does rather than engaging with the real philosophical issues.